5/15/2023 0 Comments Imagej colocalization analysisCustomizing Fiji/ImageJ with ImageJ Macro, hands-on partĤ. Data Management, Preparation of Images, Graphs, Tables for publication, Ethical codex in Image processing and publication.ģ. Introduction to Microscopic Systems and Software: methods, principles, theoretical background, Image formation in Fluorescence Microscopy, Basics of Image Analysis, Image analysis software overview.Ģ. Case studies will also include data management, statistics, and the preparation of a pictorial appendix for publication purposes.ġ. FIJI, Arivis, FairSIM, ThunderSTORM, ILASTIC, Matlab) used in image analysis. During the course, students will get acquainted with a variety of analytical programs (e.g. The course will include the preparation of slides, selection, application of microscopic techniques, and the analysis of images from wide-field, confocal, light-sheet, super-resolution (SIM, STORM / PALM) microscopic systems. The course's emphasis will be on teaching image analysis in model studies. News in microscopy industry - hardware and image analysis development Quantitative analysis of Spatial and Organisational organisation of cells by ThunderStorm plug-in, Coloc-Tesseler, Interaction Factor ThunderStorm plugin in Image J (case study) Two-photon polarization microscopy reveals protein structure and function (case study)įluorescence Lifetime Imaging (FLIM) of Cellular Metabolism, Becker and Hickel software, ImageJ (case study) Quantification and Processing data from Lightsheet Microscope, Arivis, Imagej (case study) Quantification and Processing data from Axioscan microscope (case study) Quantification and Processing data from Fluorescence Microscopes (Nis-elements, Image J) Labelling techniques in biomedical research, advantages, disadvantages, ImageJ Introduction to Microscopic Systems and Softwares : methods, principles, theoretical background, Image formation in Fluorescence Microscopy, Basics of Image Analysis, Image analysis software overview The course is aimed at explaining the workflow in Image Analysis, processing and it is assumed that the student is interested in Image Analysis. Case studies will also include the data management, statistics and the preparation of a pictorial appendix for publication purposes.īasic knowledge of Fluorescent and Confocal Microscopy, Image Analysis, and Image J, basics of programming, and statistics are required. The course will include preparation of slides, selection, application of microscopic techniques and the analysis of images from wide-field, confocal, light-sheet, super-resolution (SIM, STORM / PALM) microscopic systems. The emphasis of the course will be on teaching image analysis in model studies.
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